USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: ATPB_HUMAN USC-OGP 2-DE database:  ATPB_HUMAN ATPB_HUMAN General information about the entry View entry in simple text format Entry name ATPB_HUMAN Primary accession number P06576 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=ATP synthase subunit beta, mitochondrial; EC=3.6.3.14; Flags: Precursor;. Gene name Name=ATP5B Synonyms=ATPMB, ATPSB Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_4-7 {PLATELET 4-7} Homo sapiens (Human)   map experimental info   PLATELET_4-7 MAP LOCATIONS: SPOT OGP-0369: pI=5.00; Mw=49250 PLATELET_5-6 {PLATELET 5-6} Homo sapiens (Human)   map experimental info   PLATELET_5-6 MAP LOCATIONS: SPOT OGP-0671: pI=5.02; Mw=50928 Cross-references UniProtKB/Swiss-Prot P06576; ATPB_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name ATPB_HUMAN Primary accession number P06576 Secondary accession number(s) A8K4X0 Q14283 Sequence was last modified on  April 1, 1990 (version 3) Annotations were last modified on  March 15, 2017 (version 205) Name and origin of the protein Description RecName: Full=ATP synthase subunit beta, mitochondrial; EC=3.6.3.14; Flags: Precursor; Gene name Name=ATP5B Synonyms=ATPMB, ATPSB Encoded on Name=ATP5B; Synonyms=ATPMB, ATPSB Keywords Acetylation; ATP synthesis; ATP-binding; CF(1); Complete proteome; Direct protein sequencing; Glycoprotein; Hydrogen ion transport; Hydrolase; Ion transport; Membrane; Mitochondrion; Mitochondrion inner membrane; Nucleotide-binding; Phosphoprotein; Polymorphism; Reference proteome; Transit peptide; Transport. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL M27132; AAA51809.1; -; Genomic_DNA EMBL M19483; AAA51808.1; -; Genomic_DNA EMBL M19482; AAA51808.1; JOINED; Genomic_DNA EMBL X03559; CAA27246.1; -; mRNA EMBL D00022; BAA00016.1; -; mRNA EMBL AK291085; BAF83774.1; -; mRNA EMBL CH471054; EAW96952.1; -; Genomic_DNA EMBL BC016512; AAH16512.1; -; mRNA EMBL X05606; CAA29095.1; -; mRNA CCDS CCDS8924.1; -; . PIR A33370; A33370; . RefSeq NP_001677.2; NM_001686.3; . UniGene Hs.406510; -; . ProteinModelPortal P06576; -; . SMR P06576; -; . BioGrid 106994; 174; . IntAct P06576; 62; . MINT MINT-5004016; -; . STRING 9606.ENSP00000262030; -; . ChEMBL CHEMBL2062350; -; . DrugBank DB07384; 1-ACETYL-2-CARBOXYPIPERIDINE; . DrugBank DB07394; AUROVERTIN B; . DrugBank DB08399; PICEATANNOL; . DrugBank DB04216; Quercetin; . iPTMnet P06576; -; . PhosphoSitePlus P06576; -; . SwissPalm P06576; -; . BioMuta ATP5B; -; . DMDM 114549; -; . DOSAC-COBS-2DPAGE P06576; -; . OGP P06576; -; . REPRODUCTION-2DPAGE IPI00303476; -; . REPRODUCTION-2DPAGE P06576; -; . SWISS-2DPAGE P06576; -; . UCD-2DPAGE P06576; -; . EPD P06576; -; . PaxDb P06576; -; . PeptideAtlas P06576; -; . PRIDE P06576; -; . TopDownProteomics P06576; -; . DNASU 506; -; . Ensembl ENST00000262030; ENSP00000262030; ENSG00000110955; . GeneID 506; -; . KEGG hsa:506; -; . CTD 506; -; . DisGeNET 506; -; . GeneCards ATP5B; -; . HGNC HGNC:830; ATP5B; . HPA CAB017527; -; . HPA HPA001520; -; . HPA HPA001528; -; . MIM 102910; gene; . neXtProt NX_P06576; -; . OpenTargets ENSG00000110955; -; . PharmGKB PA25122; -; . eggNOG KOG1350; Eukaryota; . eggNOG COG0055; LUCA; . GeneTree ENSGT00550000074800; -; . HOGENOM HOG000009605; -; . HOVERGEN HBG004307; -; . InParanoid P06576; -; . KO K02133; -; . OMA AEFGIYP; -; . OrthoDB EOG091G0KVV; -; . PhylomeDB P06576; -; . TreeFam TF105640; -; . Reactome R-HSA-1268020; Mitochondrial protein import; . Reactome R-HSA-163210; Formation of ATP by chemiosmotic coupling; . Reactome R-HSA-2151201; Transcriptional activation of mitochondrial biogenesis; . ChiTaRS ATP5B; human; . GeneWiki ATP5B; -; . GenomeRNAi 506; -; . PRO PR:P06576; -; . Proteomes UP000005640; Chromosome 12; . Bgee ENSG00000110955; -; . CleanEx HS_ATP5B; -; . ExpressionAtlas P06576; baseline and differential; . Genevisible P06576; HS; . GO GO:0009986; C:cell surface; IDA:UniProtKB; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0031012; C:extracellular matrix; IDA:BHF-UCL; . GO GO:0016020; C:membrane; IDA:UniProtKB; . GO GO:0005759; C:mitochondrial matrix; NAS:UniProtKB; . GO GO:0031966; C:mitochondrial membrane; IDA:UniProtKB; . GO GO:0042645; C:mitochondrial nucleoid; IDA:BHF-UCL; . GO GO:0005753; C:mitochondrial proton-transporting ATP synthase complex; IDA:UniProtKB; . GO GO:0005754; C:mitochondrial proton-transporting ATP synthase; catalytic core; NAS:UniProtKB GO GO:0005739; C:mitochondrion; IDA:UniProtKB; . GO GO:0043209; C:myelin sheath; IEA:Ensembl; . GO GO:0005634; C:nucleus; IDA:UniProtKB; . GO GO:0005886; C:plasma membrane; IDA:UniProtKB; . GO GO:0005524; F:ATP binding; IEA:UniProtKB-KW; . GO GO:0042288; F:MHC class I protein binding; IDA:UniProtKB; . GO GO:0046933; F:proton-transporting ATP synthase activity; rotational mechanism; IEA:InterPro GO GO:0046961; F:proton-transporting ATPase activity; rotational mechanism; IMP:UniProtKB GO GO:0022857; F:transmembrane transporter activity; IC:UniProtKB; . GO GO:0005215; F:transporter activity; NAS:UniProtKB; . GO GO:0001525; P:angiogenesis; IMP:UniProtKB; . GO GO:0006754; P:ATP biosynthetic process; IMP:UniProtKB; . GO GO:0006091; P:generation of precursor metabolites and energy; NAS:UniProtKB; . GO GO:0006629; P:lipid metabolic process; IEA:Ensembl; . GO GO:0042776; P:mitochondrial ATP synthesis coupled proton transport; IC:UniProtKB; . GO GO:0007005; P:mitochondrion organization; TAS:Reactome; . GO GO:0006933; P:negative regulation of cell adhesion involved in substrate-bound cell migration; IEA:Ensembl; . GO GO:0001649; P:osteoblast differentiation; IDA:UniProtKB; . GO GO:0015992; P:proton transport; IMP:UniProtKB; . GO GO:0051453; P:regulation of intracellular pH; IMP:UniProtKB; . Gene3D 1.10.1140.10; -; 1; . Gene3D 3.40.50.300; -; 1; . HAMAP MF_01347; ATP_synth_beta_bact; 1; . InterPro IPR003593; AAA+_ATPase; . InterPro IPR005722; ATP_synth_F1_bsu; . InterPro IPR020003; ATPase_a/bsu_AS; . InterPro IPR004100; ATPase_F1/V1/A1_a/bsu_N; . InterPro IPR000194; ATPase_F1/V1/A1_a/bsu_nucl-bd; . InterPro IPR024034; ATPase_F1/V1_bsu_C; . InterPro IPR027417; P-loop_NTPase; . Pfam PF00006; ATP-synt_ab; 1; . Pfam PF02874; ATP-synt_ab_N; 1; . SMART SM00382; AAA; 1; . SUPFAM SSF50615; SSF50615; 1; . SUPFAM SSF52540; SSF52540; 1; . TIGRFAMs TIGR01039; atpD; 1; . PROSITE PS00152; ATPASE_ALPHA_BETA; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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